Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | SAMN05444680_102844 | Not Available | Positive | 1888722 - 1889453 | 26368.9 |
| two-component system, ompr family, response regulator/two-component system, ompr family, response regulator qseb | SAMN05444680_102845 | Not Available | Positive | 1889460 - 1890131 | 24562.9 |
| two-component system, ompr family, sensor histidine kinase qsec | SAMN05444680_102846 | Not Available | Positive | 1890131 - 1891504 | 49901.3 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444680_102847 | Not Available | Negative | 1891470 - 1892204 | 27254.9 |
| hypothetical protein | SAMN05444680_102848 | Not Available | Positive | 1892389 - 1892730 | 12378.8 |
| hypothetical protein | SAMN05444680_102849 | Not Available | Positive | 1892786 - 1893727 | 34032.1 |
| cdp-2,3-bis-(o-geranylgeranyl)-sn-glycerol synthase | SAMN05444680_102850 | Not Available | Negative | 1893721 - 1894212 | 17623.1 |
| ribosomal subunit interface protein | SAMN05444680_102851 | Not Available | Negative | 1894252 - 1894659 | 15436.1 |
| hypothetical protein | SAMN05444680_102852 | Not Available | Negative | 1894713 - 1895318 | 20137.6 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN05444680_102853 | Not Available | Negative | 1895378 - 1895851 | 17492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
