Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102834 | Not Available | Negative | 1877159 - 1877692 | 18803.6 |
| adenylate kinase | SAMN05444680_102835 | Not Available | Negative | 1877765 - 1878469 | 25226.4 |
| fatty-acyl-coa synthase | SAMN05444680_102836 | Not Available | Negative | 1878490 - 1880133 | 59056.9 |
| ca2+-transporting atpase | SAMN05444680_102837 | Not Available | Negative | 1880230 - 1882800 | 91226.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_102838 | Not Available | Negative | 1882835 - 1883263 | 15231.7 |
| hlyd family secretion protein | SAMN05444680_102839 | Not Available | Negative | 1883311 - 1884525 | 43276.2 |
| putative abc transport system permease protein | SAMN05444680_102840 | Not Available | Negative | 1884533 - 1886923 | 85238.1 |
| putative abc transport system atp-binding protein | SAMN05444680_102841 | Not Available | Negative | 1886931 - 1887650 | 25889.2 |
| protein of unknown function | SAMN05444680_102842 | Not Available | Positive | 1887805 - 1888230 | 14874.8 |
| dihaem cytochrome c | SAMN05444680_102843 | Not Available | Positive | 1888271 - 1888750 | 17267.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
