Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen operon protein | SAMN05444680_102824 | Not Available | Negative | 1862326 - 1864455 | 80213.4 |
| conserved tm helix | SAMN05444680_102825 | Not Available | Negative | 1864452 - 1865240 | 28831.7 |
| maltokinase | SAMN05444680_102826 | Not Available | Negative | 1865276 - 1868596 | 126033.0 |
| alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | SAMN05444680_102827 | Not Available | Negative | 1868607 - 1870652 | 78163.2 |
| 1,4-alpha-glucan branching enzyme | SAMN05444680_102828 | Not Available | Negative | 1870627 - 1872507 | 70844.1 |
| serine protease do | SAMN05444680_102829 | Not Available | Negative | 1872700 - 1874259 | 53981.8 |
| putative abc transport system substrate-binding protein | SAMN05444680_102830 | Not Available | Negative | 1874267 - 1875265 | 36030.5 |
| transcriptional regulator, tetr family | SAMN05444680_102831 | Not Available | Negative | 1875366 - 1875998 | 23425.3 |
| hypothetical protein | SAMN05444680_102832 | Not Available | Negative | 1876034 - 1876513 | 16994.5 |
| hypothetical protein | SAMN05444680_102833 | Not Available | Negative | 1876568 - 1877038 | 16145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
