Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102813 | Not Available | Positive | 1849653 - 1850633 | 34397.7 |
| enoyl-coa hydratase | SAMN05444680_102814 | Not Available | Positive | 1850630 - 1851427 | 28297.4 |
| hypothetical protein | SAMN05444680_102815 | Not Available | Negative | 1851438 - 1851740 | 11070.1 |
| hypothetical protein | SAMN05444680_102817 | Not Available | Positive | 1852130 - 1853011 | 32246.1 |
| hypothetical protein | SAMN05444680_102818 | Not Available | Positive | 1853026 - 1853673 | 22843.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_102819 | Not Available | Positive | 1853712 - 1854350 | 22672.0 |
| uncharacterized conserved protein, duf1330 family | SAMN05444680_102820 | Not Available | Negative | 1854469 - 1854759 | 10326.2 |
| hypothetical protein | SAMN05444680_102821 | Not Available | Negative | 1854879 - 1855154 | 9864.62 |
| maltooligosyl trehalose synthase | SAMN05444680_102822 | Not Available | Negative | 1855258 - 1860411 | 191133.0 |
| maltooligosyl trehalose hydrolase | SAMN05444680_102823 | Not Available | Negative | 1860404 - 1862269 | 68843.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
