Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444680_101120 | Not Available | Negative | 128574 - 129002 | 15081.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444680_101121 | Not Available | Negative | 128999 - 129565 | 21535.4 |
| acetolactate synthase, large subunit | SAMN05444680_101122 | Not Available | Positive | 129846 - 131621 | 65206.9 |
| acetolactate synthase, small subunit | SAMN05444680_101123 | Not Available | Positive | 131749 - 132240 | 18056.0 |
| ketol-acid reductoisomerase | SAMN05444680_101124 | Not Available | Positive | 132285 - 133301 | 36720.1 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05444680_101125 | Not Available | Positive | 133465 - 134289 | 30098.9 |
| 2-isopropylmalate synthase | SAMN05444680_101126 | Not Available | Positive | 134469 - 136172 | 62732.6 |
| 2-isopropylmalate synthase | SAMN05444680_101127 | Not Available | Positive | 136255 - 137793 | 55205.5 |
| murein-dd-endopeptidase. serine peptidase. merops family s11 | SAMN05444680_101128 | Not Available | Positive | 137908 - 139086 | 42201.8 |
| transcriptional regulator, iclr family | SAMN05444680_101129 | Not Available | Negative | 139151 - 139945 | 28957.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
