Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component | SAMN05444680_102783 | Not Available | Positive | 1819321 - 1822035 | 101188.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05444680_102784 | Not Available | Positive | 1822082 - 1823731 | 56337.8 |
| atp-dependent protease hslvu (clpyq), peptidase subunit | SAMN05444680_102785 | Not Available | Positive | 1823728 - 1824318 | 21452.5 |
| dihydrolipoamide dehydrogenase | SAMN05444680_102786 | Not Available | Positive | 1824315 - 1826135 | 62888.2 |
| cell wall-associated hydrolase, nlpc family | SAMN05444680_102787 | Not Available | Negative | 1826287 - 1826853 | 20765.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05444680_102788 | Not Available | Positive | 1827073 - 1828206 | 40906.1 |
| putative esterase | SAMN05444680_102789 | Not Available | Negative | 1828203 - 1828940 | 26607.9 |
| 4-hydroxybutyryl-coa dehydratase / vinylacetyl-coa-delta-isomerase | SAMN05444680_102790 | Not Available | Negative | 1828999 - 1830651 | 60117.3 |
| nicotinamidase-related amidase | SAMN05444680_102791 | Not Available | Positive | 1830727 - 1831371 | 23535.3 |
| tetratricopeptide repeat-containing protein | SAMN05444680_102792 | Not Available | Negative | 1831384 - 1832217 | 30939.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
