Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase lhgo | SAMN05444680_102773 | Not Available | Positive | 1808038 - 1809135 | 38005.8 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05444680_102774 | Not Available | Positive | 1809226 - 1809534 | 10656.8 |
| uncharacterized membrane protein yqje | SAMN05444680_102775 | Not Available | Positive | 1809607 - 1810293 | 25248.2 |
| dihydroorotate oxidase a | SAMN05444680_102776 | Not Available | Negative | 1810304 - 1811371 | 37767.7 |
| ribose-5-phosphate isomerase | SAMN05444680_102777 | Not Available | Positive | 1811412 - 1812113 | 24551.7 |
| glutaredoxin | SAMN05444680_102778 | Not Available | Negative | 1812137 - 1812763 | 21613.5 |
| oligopeptidase a metallo peptidase. merops family m03a | SAMN05444680_102779 | Not Available | Negative | 1812821 - 1814872 | 76057.8 |
| methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN05444680_102780 | Not Available | Negative | 1815000 - 1815851 | 29843.4 |
| two component transcriptional regulator, luxr family | SAMN05444680_102781 | Not Available | Negative | 1815925 - 1816554 | 23068.0 |
| pas domain s-box-containing protein | SAMN05444680_102782 | Not Available | Negative | 1816551 - 1818980 | 89684.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
