Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, badm/rrf2 family | SAMN05444680_102763 | Not Available | Positive | 1801390 - 1801926 | 19308.4 |
| cysteine desulfurase iscs | SAMN05444680_102764 | Not Available | Positive | 1801998 - 1803218 | 45000.1 |
| fes assembly scaffold apoprotein iscu | SAMN05444680_102765 | Not Available | Positive | 1803237 - 1803650 | 14333.0 |
| iron-binding apoprotein isca | SAMN05444680_102766 | Not Available | Positive | 1803652 - 1803975 | 11799.0 |
| molecular chaperone hscb | SAMN05444680_102767 | Not Available | Positive | 1804036 - 1804554 | 19722.1 |
| hypothetical protein | SAMN05444680_102768 | Not Available | Positive | 1804559 - 1804648 | 3120.66 |
| molecular chaperone hsca | SAMN05444680_102769 | Not Available | Positive | 1804648 - 1806504 | 65283.7 |
| ferredoxin, 2fe-2s | SAMN05444680_102770 | Not Available | Positive | 1806515 - 1806853 | 12403.6 |
| dna polymerase-3 subunit epsilon | SAMN05444680_102771 | Not Available | Positive | 1806853 - 1807572 | 26501.6 |
| Trna-val | Not Available | Not Available | Positive | 1807636 - 1807710 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
