Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | SAMN05444680_102753 | Not Available | Positive | 1787479 - 1789638 | 78113.1 |
| lao/ao transport system kinase | SAMN05444680_102754 | Not Available | Positive | 1789640 - 1790695 | 37066.5 |
| propionyl-coa carboxylase carboxyltransferase subunit | SAMN05444680_102755 | Not Available | Positive | 1790706 - 1792295 | 58179.1 |
| propionyl-coa carboxylase alpha chain | SAMN05444680_102756 | Not Available | Positive | 1792316 - 1794364 | 74196.0 |
| lactoylglutathione lyase | SAMN05444680_102757 | Not Available | Positive | 1794364 - 1794840 | 17208.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_102758 | Not Available | Negative | 1794854 - 1795489 | 22068.6 |
| electron transport complex protein rnfb | SAMN05444680_102759 | Not Available | Negative | 1795486 - 1796100 | 21943.4 |
| poly(3-hydroxybutyrate) depolymerase | SAMN05444680_102760 | Not Available | Negative | 1796105 - 1797508 | 52511.5 |
| aromatic-amino-acid transaminase | SAMN05444680_102761 | Not Available | Negative | 1797744 - 1798940 | 42803.6 |
| excinuclease abc subunit b | SAMN05444680_102762 | Not Available | Positive | 1799050 - 1801173 | 80278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
