Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05444680_102743 | Not Available | Negative | 1778386 - 1779591 | 40911.5 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_102744 | Not Available | Negative | 1779621 - 1780844 | 42119.7 |
| glutathione s-transferase | SAMN05444680_102745 | Not Available | Positive | 1780913 - 1782172 | 46230.9 |
| hypothetical protein | SAMN05444680_102746 | Not Available | Positive | 1782238 - 1782402 | 6259.82 |
| hypothetical protein | SAMN05444680_102747 | Not Available | Positive | 1782429 - 1782797 | 14238.9 |
| pp_01698 | SAMN05444680_102748 | Not Available | Positive | 1782868 - 1783872 | Not Available |
| 2,4-dichlorophenoxyacetate monooxygenase | SAMN05444680_102749 | Not Available | Negative | 1783888 - 1784766 | 33356.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102750 | Not Available | Negative | 1784798 - 1785787 | 35323.1 |
| transcriptional regulator, iclr family | SAMN05444680_102751 | Not Available | Positive | 1785898 - 1786695 | 28251.1 |
| transcriptional regulator, gntr family | SAMN05444680_102752 | Not Available | Negative | 1786702 - 1787349 | 24272.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
