Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102733 | Not Available | Positive | 1768562 - 1768780 | 8041.51 |
| hypothetical protein | SAMN05444680_102734 | Not Available | Positive | 1768810 - 1769385 | 21111.6 |
| xylulokinase | SAMN05444680_102735 | Not Available | Negative | 1769389 - 1770855 | 51298.6 |
| transcriptional regulator, arac family | SAMN05444680_102736 | Not Available | Negative | 1770865 - 1771803 | 35803.5 |
| d-sorbitol dehydrogenase (acceptor) | SAMN05444680_102737 | Not Available | Negative | 1771829 - 1772617 | 27669.4 |
| d-arabinitol 4-dehydrogenase | SAMN05444680_102738 | Not Available | Negative | 1772614 - 1774032 | 52115.8 |
| sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding protein | SAMN05444680_102739 | Not Available | Negative | 1774042 - 1775076 | 37272.1 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05444680_102740 | Not Available | Negative | 1775098 - 1775919 | 30080.4 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05444680_102741 | Not Available | Negative | 1775933 - 1776790 | 31704.8 |
| sorbitol-binding protein /mannitol-binding protein | SAMN05444680_102742 | Not Available | Negative | 1776906 - 1778213 | 47409.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
