Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102713 | Not Available | Negative | 1748407 - 1748703 | 10264.6 |
| polyhydroxyalkanoate synthase | SAMN05444680_102714 | Not Available | Positive | 1748807 - 1750531 | 63133.8 |
| acetyl-coa acetyltransferase | SAMN05444680_102715 | Not Available | Positive | 1750715 - 1751893 | 40456.0 |
| regulator of rnase e activity rraa | SAMN05444680_102716 | Not Available | Positive | 1751984 - 1752667 | 24585.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102717 | Not Available | Positive | 1752780 - 1753775 | 35270.4 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444680_102718 | Not Available | Negative | 1753791 - 1754666 | 31666.8 |
| transcriptional regulator, lysr family | SAMN05444680_102719 | Not Available | Negative | 1754663 - 1755643 | 35667.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102720 | Not Available | Positive | 1755760 - 1756719 | 34187.3 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_102721 | Not Available | Positive | 1756722 - 1757966 | 44440.3 |
| cupin domain protein | SAMN05444680_102722 | Not Available | Positive | 1757970 - 1758359 | 14145.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
