Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitt/taut family transport system substrate-binding protein | SAMN05444680_102635 | Not Available | Negative | 1681653 - 1682654 | 35586.0 |
| nitt/taut family transport system permease protein | SAMN05444680_102636 | Not Available | Negative | 1682690 - 1683463 | 28147.8 |
| transcriptional regulator, tetr family | SAMN05444680_102637 | Not Available | Negative | 1683607 - 1684254 | 24825.8 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444680_102638 | Not Available | Positive | 1684357 - 1686072 | 61357.2 |
| swib/mdm2 domain-containing protein | SAMN05444680_102639 | Not Available | Negative | 1686146 - 1686565 | 14478.1 |
| threonine/homoserine efflux transporter rhta | SAMN05444680_102640 | Not Available | Negative | 1686750 - 1687616 | 30156.9 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN05444680_102641 | Not Available | Positive | 1687708 - 1688133 | 15046.0 |
| isocitrate lyase | SAMN05444680_102642 | Not Available | Positive | 1688350 - 1689681 | 48612.2 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444680_102643 | Not Available | Negative | 1689750 - 1690712 | 35028.2 |
| quinol monooxygenase ygin | SAMN05444680_102644 | Not Available | Positive | 1690825 - 1691136 | 11185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
