Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains mth938-like domain | SAMN05444680_102604 | Not Available | Negative | 1652892 - 1653278 | 13939.7 |
| alanine-synthesizing transaminase | SAMN05444680_102605 | Not Available | Positive | 1653345 - 1654568 | 45087.5 |
| homoserine dehydrogenase | SAMN05444680_102606 | Not Available | Positive | 1654619 - 1655941 | 46462.6 |
| threonine synthase | SAMN05444680_102607 | Not Available | Positive | 1655941 - 1657356 | 52004.1 |
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN05444680_102608 | Not Available | Positive | 1657480 - 1658025 | 20289.3 |
| molybdopterin molybdotransferase | SAMN05444680_102609 | Not Available | Positive | 1658018 - 1659265 | 43802.6 |
| molybdopterin synthase sulfur carrier subunit | SAMN05444680_102610 | Not Available | Positive | 1659268 - 1659519 | 8699.37 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444680_102611 | Not Available | Negative | 1659506 - 1660396 | 31384.1 |
| molybdopterin synthase subunit moae | SAMN05444680_102612 | Not Available | Positive | 1660646 - 1661122 | 17551.9 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102613 | Not Available | Negative | 1661254 - 1662246 | 34497.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
