Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide reductase osmc/ohra | SAMN05444680_102564 | Not Available | Positive | 1617493 - 1617975 | 17349.4 |
| excinuclease abc subunit c | SAMN05444680_102565 | Not Available | Positive | 1617959 - 1619938 | 72812.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05444680_102566 | Not Available | Positive | 1620088 - 1620654 | 21004.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_102567 | Not Available | Positive | 1620651 - 1621532 | 31192.2 |
| transcriptional regulator, lysr family | SAMN05444680_102568 | Not Available | Negative | 1621539 - 1622492 | 34998.2 |
| haloacetate dehalogenase | SAMN05444680_102569 | Not Available | Positive | 1622559 - 1623449 | 32754.2 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05444680_102570 | Not Available | Positive | 1623453 - 1624538 | 39571.5 |
| bacterial nucleoid protein hbs | SAMN05444680_102571 | Not Available | Positive | 1624759 - 1625031 | 9458.64 |
| Trna-val | Not Available | Not Available | Positive | 1625049 - 1625124 | Not Available |
| peptidyl-prolyl cis-trans isomerase d | SAMN05444680_102573 | Not Available | Positive | 1625200 - 1627113 | 69339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
