Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu2+-exporting atpase | SAMN05444680_101100 | Not Available | Positive | 111812 - 114148 | 82928.1 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN05444680_101101 | Not Available | Positive | 114154 - 114291 | 5196.45 |
| cytochrome c oxidase cbb3-type subunit 1 | SAMN05444680_101102 | Not Available | Positive | 114371 - 115810 | 53241.9 |
| cytochrome c oxidase cbb3-type subunit 2 | SAMN05444680_101103 | Not Available | Positive | 115830 - 116459 | 23436.1 |
| cytochrome c oxidase cbb3-type subunit 4 | SAMN05444680_101104 | Not Available | Positive | 116471 - 116614 | 5252.29 |
| cytochrome c oxidase cbb3-type subunit 3 | SAMN05444680_101105 | Not Available | Positive | 116619 - 117542 | 33086.6 |
| cytochrome c oxidase accessory protein fixg | SAMN05444680_101106 | Not Available | Positive | 117553 - 118980 | 53569.5 |
| hypothetical protein | SAMN05444680_101107 | Not Available | Positive | 119001 - 119279 | 10318.6 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN05444680_101108 | Not Available | Negative | 119299 - 119958 | 24986.5 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444680_101109 | Not Available | Positive | 120138 - 121556 | 52837.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
