Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102554 | Not Available | Negative | 1607547 - 1607945 | 14776.6 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05444680_102555 | Not Available | Negative | 1608009 - 1608242 | 9050.65 |
| nicotinate phosphoribosyltransferase | SAMN05444680_102556 | Not Available | Positive | 1608433 - 1609647 | 46478.3 |
| transporter, uit6 family | SAMN05444680_102557 | Not Available | Positive | 1609644 - 1611068 | 50771.1 |
| gluconate 2-dehydrogenase | SAMN05444680_102558 | Not Available | Positive | 1611071 - 1612057 | 35297.7 |
| dna recombination protein rmuc | SAMN05444680_102559 | Not Available | Positive | 1612074 - 1613420 | 49637.2 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_102560 | Not Available | Positive | 1613417 - 1614604 | 40927.2 |
| hypothetical protein | SAMN05444680_102561 | Not Available | Negative | 1614715 - 1615608 | 33308.0 |
| translation elongation factor p (ef-p) | SAMN05444680_102562 | Not Available | Negative | 1615699 - 1616253 | 20773.0 |
| conserved hypothetical protein, pp_1857 family | SAMN05444680_102563 | Not Available | Negative | 1616372 - 1617445 | 39869.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
