Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102492 | Not Available | Negative | 1548020 - 1548640 | 22214.4 |
| hypothetical protein | SAMN05444680_102493 | Not Available | Negative | 1548610 - 1548777 | 5979.3 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN05444680_102494 | Not Available | Negative | 1548853 - 1550790 | 69624.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102495 | Not Available | Negative | 1550814 - 1551815 | 34059.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102496 | Not Available | Positive | 1551920 - 1552828 | 32472.7 |
| hypothetical protein | SAMN05444680_102497 | Not Available | Negative | 1552874 - 1553302 | 15313.5 |
| hypothetical protein | SAMN05444680_102498 | Not Available | Negative | 1553437 - 1553616 | 6844.12 |
| osmotically inducible protein osmc | SAMN05444680_102500 | Not Available | Negative | 1553887 - 1554327 | 15210.2 |
| fatty-acyl-coa synthase | SAMN05444680_102501 | Not Available | Positive | 1554524 - 1556218 | 62577.2 |
| lysm repeat-containing protein | SAMN05444680_102502 | Not Available | Positive | 1556564 - 1557289 | 27018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
