Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, merr family | SAMN05444680_102482 | Not Available | Positive | 1540145 - 1540618 | 17510.7 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444680_102483 | Not Available | Negative | 1540623 - 1541630 | 36421.7 |
| protein of unknown function | SAMN05444680_102484 | Not Available | Negative | 1541627 - 1542205 | 20907.1 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444680_102485 | Not Available | Negative | 1542261 - 1543043 | 28276.9 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444680_102486 | Not Available | Negative | 1543027 - 1543680 | 23519.4 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444680_102487 | Not Available | Negative | 1543688 - 1544350 | 24023.0 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_102488 | Not Available | Negative | 1544363 - 1545154 | 28114.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102489 | Not Available | Negative | 1545227 - 1546192 | 33988.3 |
| protein of unknown function | SAMN05444680_102490 | Not Available | Negative | 1546245 - 1546871 | 22523.9 |
| putative abc transport system substrate-binding protein | SAMN05444680_102491 | Not Available | Negative | 1547287 - 1548018 | 25928.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
