Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444680_102472 | Not Available | Positive | 1527604 - 1528980 | 51624.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444680_102473 | Not Available | Positive | 1529008 - 1529883 | 32549.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444680_102474 | Not Available | Positive | 1529880 - 1530728 | 31196.7 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_102475 | Not Available | Positive | 1530845 - 1531915 | 38823.9 |
| atp-dependent rna helicase rhle | SAMN05444680_102476 | Not Available | Negative | 1531987 - 1533771 | 62952.9 |
| predicted methyltransferase, contains tpr repeat | SAMN05444680_102477 | Not Available | Negative | 1534003 - 1535235 | 44711.0 |
| sulfate-transporting atpase | SAMN05444680_102478 | Not Available | Positive | 1535457 - 1537118 | 61143.8 |
| nmt1-like family protein | SAMN05444680_102479 | Not Available | Negative | 1537119 - 1538480 | 50345.9 |
| hypothetical protein | SAMN05444680_102480 | Not Available | Positive | 1538722 - 1538949 | 7894.32 |
| l-aminopeptidase/d-esterase | SAMN05444680_102481 | Not Available | Negative | 1538919 - 1539965 | 35267.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
