Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-haloacid dehalogenase | SAMN05444680_102452 | Not Available | Positive | 1508713 - 1509432 | 25889.1 |
| lactoylglutathione lyase | SAMN05444680_102453 | Not Available | Negative | 1509451 - 1509843 | 14025.6 |
| uncharacterized domain 1-containing protein | SAMN05444680_102454 | Not Available | Negative | 1509959 - 1510495 | 19057.3 |
| dna-binding transcriptional regulator, marr family | SAMN05444680_102455 | Not Available | Positive | 1510522 - 1511010 | 17867.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444680_102456 | Not Available | Positive | 1511003 - 1512250 | 42480.3 |
| putative efflux protein, mate family | SAMN05444680_102457 | Not Available | Positive | 1512247 - 1513650 | 48425.8 |
| short-chain dehydrogenase | SAMN05444680_102458 | Not Available | Positive | 1513685 - 1514395 | 24404.2 |
| 2-keto-3-deoxy-phosphogalactonate aldolase | SAMN05444680_102459 | Not Available | Negative | 1514443 - 1515084 | 21792.7 |
| 2-keto-3-deoxygalactonate kinase | SAMN05444680_102460 | Not Available | Negative | 1515081 - 1515983 | 32315.9 |
| reactive intermediate/imine deaminase | SAMN05444680_102461 | Not Available | Negative | 1516006 - 1516398 | 14296.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
