Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05444680_102442 | Not Available | Positive | 1499475 - 1501529 | 73616.4 |
| acylphosphatase | SAMN05444680_102443 | Not Available | Positive | 1501623 - 1501931 | 11259.6 |
| hypothetical protein | SAMN05444680_102444 | Not Available | Positive | 1501962 - 1502921 | 33215.2 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444680_102445 | Not Available | Negative | 1502928 - 1503578 | 24770.3 |
| molybdenum cofactor cytidylyltransferase | SAMN05444680_102446 | Not Available | Positive | 1503620 - 1504198 | 19615.5 |
| superoxide dismutase, cu-zn family | SAMN05444680_102447 | Not Available | Negative | 1504185 - 1504724 | 17562.8 |
| cation transport protein chac | SAMN05444680_102448 | Not Available | Negative | 1504745 - 1505359 | 23273.8 |
| ompa family protein | SAMN05444680_102449 | Not Available | Positive | 1505510 - 1506049 | 18596.6 |
| 6-phosphogluconate dehydratase | SAMN05444680_102450 | Not Available | Positive | 1506252 - 1508090 | 64972.0 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05444680_102451 | Not Available | Positive | 1508081 - 1508716 | 21765.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
