Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN05444680_102432 | Not Available | Positive | 1487871 - 1489244 | 49322.3 |
| autotransporter family porin | SAMN05444680_102433 | Not Available | Negative | 1489249 - 1490367 | 39986.6 |
| outer membrane protein | SAMN05444680_102434 | Not Available | Negative | 1490497 - 1492035 | 53843.5 |
| rhodanese-related sulfurtransferase | SAMN05444680_102435 | Not Available | Negative | 1492175 - 1492510 | 12074.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SAMN05444680_102436 | Not Available | Negative | 1492527 - 1493216 | 25312.7 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444680_102437 | Not Available | Negative | 1493237 - 1496467 | 117254.0 |
| rnd family efflux transporter, mfp subunit | SAMN05444680_102438 | Not Available | Negative | 1496482 - 1497669 | 41420.7 |
| transcriptional regulator, tetr family | SAMN05444680_102439 | Not Available | Negative | 1497666 - 1498340 | 25396.8 |
| peptide-methionine (s)-s-oxide reductase | SAMN05444680_102440 | Not Available | Positive | 1498462 - 1499013 | 20529.0 |
| hypothetical protein | SAMN05444680_102441 | Not Available | Positive | 1499013 - 1499399 | 13434.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
