Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(i)-responsive transcriptional regulator | SAMN05444680_102422 | Not Available | Negative | 1476599 - 1476997 | 14916.9 |
| cu+-exporting atpase | SAMN05444680_102423 | Not Available | Negative | 1476994 - 1479237 | 78060.8 |
| hypothetical protein | SAMN05444680_102424 | Not Available | Positive | 1479386 - 1480360 | 36285.4 |
| cytochrome c, mono-and diheme variants | SAMN05444680_102425 | Not Available | Negative | 1480377 - 1481645 | 45442.1 |
| cytochrome c553 | SAMN05444680_102426 | Not Available | Negative | 1481661 - 1482392 | 25945.4 |
| uncharacterized membrane protein | SAMN05444680_102427 | Not Available | Positive | 1482475 - 1483215 | 26797.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_102428 | Not Available | Negative | 1483168 - 1484139 | 33804.0 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN05444680_102429 | Not Available | Negative | 1484136 - 1484636 | 17752.1 |
| dna-3-methyladenine glycosylase ii | SAMN05444680_102430 | Not Available | Negative | 1484651 - 1486204 | 55521.7 |
| phosphomannomutase | SAMN05444680_102431 | Not Available | Positive | 1486316 - 1487698 | 48742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
