Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102402 | Not Available | Positive | 1458213 - 1458374 | 5881.17 |
| peptidase m30 | SAMN05444680_102403 | Not Available | Positive | 1458545 - 1460197 | 58047.1 |
| alkyl sulfatase bds1, metallo-beta-lactamase superfamily | SAMN05444680_102404 | Not Available | Negative | 1460208 - 1462187 | 71786.4 |
| choline dehydrogenase | SAMN05444680_102405 | Not Available | Negative | 1462230 - 1463843 | 57893.0 |
| coniferyl-aldehyde dehydrogenase | SAMN05444680_102406 | Not Available | Negative | 1463840 - 1465327 | 54860.6 |
| transcriptional regulator, arac family | SAMN05444680_102407 | Not Available | Positive | 1465533 - 1466597 | 38740.5 |
| methyltransferase domain-containing protein | SAMN05444680_102408 | Not Available | Negative | 1466627 - 1467439 | 29610.5 |
| uncharacterized osmc-related protein | SAMN05444680_102409 | Not Available | Positive | 1467718 - 1468251 | 18774.3 |
| arac-type dna-binding protein | SAMN05444680_102410 | Not Available | Positive | 1468260 - 1469249 | 35672.1 |
| protein of unknown function | SAMN05444680_102411 | Not Available | Negative | 1469366 - 1469755 | 13220.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
