Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, spx/mgsr family | SAMN05444680_102392 | Not Available | Negative | 1450436 - 1450789 | 13231.6 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05444680_102393 | Not Available | Positive | 1450836 - 1452131 | 46623.1 |
| dedd protein | SAMN05444680_102394 | Not Available | Positive | 1452194 - 1453060 | 30100.8 |
| membrane protein required for colicin v production | SAMN05444680_102395 | Not Available | Positive | 1453077 - 1453562 | 17112.5 |
| amidophosphoribosyltransferase | SAMN05444680_102396 | Not Available | Positive | 1453575 - 1455074 | 54526.5 |
| o-succinylhomoserine sulfhydrylase | SAMN05444680_102397 | Not Available | Positive | 1455082 - 1456305 | 43119.6 |
| glutamyl-trna synthetase | SAMN05444680_102398 | Not Available | Positive | 1456302 - 1457690 | 51390.6 |
| Trna-ala | Not Available | Not Available | Positive | 1457742 - 1457817 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1457852 - 1457927 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1457987 - 1458063 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
