Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN05444680_102382 | Not Available | Positive | 1442852 - 1443913 | 38776.5 |
| cys-trna(pro) deacylase | SAMN05444680_102383 | Not Available | Positive | 1443984 - 1444499 | 18428.3 |
| acyl-phosphate glycerol-3-phosphate acyltransferase | SAMN05444680_102384 | Not Available | Positive | 1444552 - 1445187 | 22201.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_102385 | Not Available | Positive | 1445197 - 1445550 | 12560.1 |
| aspartyl protease family protein | SAMN05444680_102386 | Not Available | Negative | 1445662 - 1446318 | 22605.3 |
| hypothetical protein | SAMN05444680_102387 | Not Available | Negative | 1446318 - 1446803 | 17876.6 |
| udp-n-acetylmuramate dehydrogenase | SAMN05444680_102388 | Not Available | Positive | 1446880 - 1447932 | 38264.0 |
| argininosuccinate synthase | SAMN05444680_102389 | Not Available | Negative | 1448034 - 1449365 | 49395.0 |
| hypothetical protein | SAMN05444680_102390 | Not Available | Negative | 1449380 - 1449703 | 11328.2 |
| hypothetical protein | SAMN05444680_102391 | Not Available | Negative | 1449830 - 1450357 | 18486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
