Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein (porin) | SAMN05444680_102372 | Not Available | Positive | 1431686 - 1432759 | 37037.6 |
| hippurate hydrolase | SAMN05444680_102373 | Not Available | Negative | 1432760 - 1433944 | 42303.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102374 | Not Available | Negative | 1433953 - 1434930 | 34736.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102375 | Not Available | Positive | 1435096 - 1435980 | 32621.3 |
| Trna-thr | Not Available | Not Available | Positive | 1436179 - 1436254 | Not Available |
| d-fructose 1,6-bisphosphatase | SAMN05444680_102377 | Not Available | Negative | 1436266 - 1437273 | 36956.5 |
| alanyl aminopeptidase. metallo peptidase. merops family m01 | SAMN05444680_102378 | Not Available | Negative | 1437292 - 1439982 | 99882.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444680_102379 | Not Available | Negative | 1439969 - 1440655 | 24763.6 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN05444680_102380 | Not Available | Negative | 1440655 - 1441557 | 33496.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_102381 | Not Available | Negative | 1441851 - 1442768 | 35036.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
