Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, mapeg superfamily | SAMN05444680_10180 | Not Available | Positive | 92701 - 93093 | 14027.3 |
| nitt/taut family transport system substrate-binding protein | SAMN05444680_10181 | Not Available | Positive | 93206 - 94243 | 36240.6 |
| nitt/taut family transport system atp-binding protein | SAMN05444680_10182 | Not Available | Positive | 94292 - 95107 | 29771.1 |
| nitt/taut family transport system permease protein | SAMN05444680_10183 | Not Available | Positive | 95109 - 95942 | 30380.7 |
| membrane-bound lytic murein transglycosylase d | SAMN05444680_10184 | Not Available | Negative | 95962 - 97524 | 57057.2 |
| hydroxyacylglutathione hydrolase | SAMN05444680_10185 | Not Available | Negative | 97521 - 98318 | 28425.8 |
| methyltransferase domain-containing protein | SAMN05444680_10186 | Not Available | Positive | 98338 - 99126 | 30176.2 |
| rnase hi | SAMN05444680_10187 | Not Available | Positive | 99123 - 99572 | 16646.9 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444680_10188 | Not Available | Negative | 99837 - 100316 | 18206.9 |
| molybdopterin molybdotransferase | SAMN05444680_10189 | Not Available | Negative | 100348 - 101658 | 45840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
