Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05444680_102322 | Not Available | Positive | 1381954 - 1383177 | 41504.3 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05444680_102323 | Not Available | Positive | 1383632 - 1384348 | 25077.2 |
| hypothetical protein | SAMN05444680_102324 | Not Available | Negative | 1384361 - 1384603 | 8334.89 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_102325 | Not Available | Positive | 1384892 - 1386076 | 41682.6 |
| dna-binding transcriptional regulator, marr family | SAMN05444680_102326 | Not Available | Negative | 1386099 - 1386542 | 16521.8 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444680_102327 | Not Available | Positive | 1386664 - 1388358 | 61358.8 |
| arylsulfotransferase (asst) | SAMN05444680_102328 | Not Available | Positive | 1388653 - 1390080 | 50910.0 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05444680_102329 | Not Available | Negative | 1390085 - 1390861 | 29032.1 |
| dna-binding transcriptional activator of the sarp family | SAMN05444680_102330 | Not Available | Positive | 1391023 - 1392582 | 56592.1 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN05444680_102331 | Not Available | Positive | 1392622 - 1393035 | 14332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
