Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanine deaminase | SAMN05444680_102282 | Not Available | Positive | 1339953 - 1341236 | 47076.5 |
| dctp deaminase | SAMN05444680_102283 | Not Available | Positive | 1341308 - 1341874 | 21247.2 |
| hypothetical protein | SAMN05444680_102284 | Not Available | Positive | 1341948 - 1342832 | 31319.7 |
| superfamily ii dna and rna helicase | SAMN05444680_102285 | Not Available | Positive | 1342981 - 1344441 | 53655.1 |
| bis(5'nucleosyl)-tetraphosphatase, apah | SAMN05444680_102286 | Not Available | Negative | 1344470 - 1345312 | 30536.6 |
| putative hemolysin | SAMN05444680_102287 | Not Available | Positive | 1345336 - 1346649 | 47290.4 |
| nadph2:quinone reductase | SAMN05444680_102288 | Not Available | Positive | 1346703 - 1347836 | 39798.3 |
| flagella synthesis protein flgn | SAMN05444680_102289 | Not Available | Negative | 1347857 - 1348312 | 16594.6 |
| anti-sigma-28 factor, flgm family | SAMN05444680_102290 | Not Available | Negative | 1348309 - 1348599 | 9674.24 |
| flagella basal body p-ring formation protein flga | SAMN05444680_102291 | Not Available | Negative | 1348720 - 1349424 | 24816.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
