Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_102272 | Not Available | Positive | 1329489 - 1330520 | 37524.6 |
| adenosine deaminase | SAMN05444680_102273 | Not Available | Positive | 1330520 - 1331572 | 38926.4 |
| sugar phosphate permease | SAMN05444680_102274 | Not Available | Negative | 1331530 - 1332813 | 44185.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102275 | Not Available | Positive | 1332898 - 1333836 | 33528.7 |
| hypothetical protein | SAMN05444680_102276 | Not Available | Negative | 1333860 - 1334150 | 10278.4 |
| phospholipase c | SAMN05444680_102277 | Not Available | Negative | 1334183 - 1336384 | 81726.5 |
| endoglucanase/mannan endo-1,4-beta-mannosidase/cellulose 1,4-beta-cellobiosidase | SAMN05444680_102278 | Not Available | Negative | 1336399 - 1336623 | 7146.13 |
| nucleoside-binding protein | SAMN05444680_102279 | Not Available | Positive | 1336826 - 1337923 | 39885.8 |
| hypothetical protein | SAMN05444680_102280 | Not Available | Negative | 1337946 - 1338608 | 24665.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_102281 | Not Available | Negative | 1338605 - 1339753 | 42376.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
