Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102252 | Not Available | Negative | 1304236 - 1305201 | 34113.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444680_102253 | Not Available | Negative | 1305272 - 1306210 | 33689.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102254 | Not Available | Positive | 1306336 - 1307316 | 35155.3 |
| 4-hydroxybenzoyl-coa thioesterase | SAMN05444680_102255 | Not Available | Negative | 1307302 - 1307724 | 15894.0 |
| trap transporter, dctm subunit | SAMN05444680_102256 | Not Available | Negative | 1308011 - 1309312 | 45908.6 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444680_102257 | Not Available | Negative | 1309309 - 1309854 | 20377.0 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444680_102258 | Not Available | Negative | 1309854 - 1310900 | 37636.9 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN05444680_102259 | Not Available | Negative | 1311033 - 1312646 | 58151.7 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN05444680_102260 | Not Available | Negative | 1312643 - 1314796 | 77408.4 |
| cytochrome c553 | SAMN05444680_102261 | Not Available | Negative | 1314945 - 1315556 | 21934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
