Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444680_102242 | Not Available | Positive | 1290336 - 1291244 | 33639.6 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444680_102243 | Not Available | Positive | 1291241 - 1292119 | 32629.4 |
| tetratricopeptide (tpr) repeat | SAMN05444680_102244 | Not Available | Negative | 1292109 - 1293869 | 64201.6 |
| hypothetical protein | SAMN05444680_102245 | Not Available | Negative | 1293869 - 1294330 | 17543.1 |
| protein of unknown function | SAMN05444680_102246 | Not Available | Positive | 1294414 - 1294917 | 18998.6 |
| spw repeat-containing protein | SAMN05444680_102247 | Not Available | Positive | 1294975 - 1295337 | 13137.2 |
| chat domain-containing protein | SAMN05444680_102248 | Not Available | Negative | 1295362 - 1301319 | 213479.0 |
| caspase domain-containing protein | SAMN05444680_102249 | Not Available | Negative | 1301350 - 1302192 | 29720.5 |
| l-alanine-dl-glutamate epimerase | SAMN05444680_102250 | Not Available | Negative | 1302341 - 1303507 | 42708.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_102251 | Not Available | Negative | 1303548 - 1304246 | 23387.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
