Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine kinase | SAMN05444680_102232 | Not Available | Negative | 1277283 - 1278326 | 38093.6 |
| hypothetical protein | SAMN05444680_102233 | Not Available | Negative | 1278334 - 1278744 | 15022.6 |
| dna polymerase i | SAMN05444680_102234 | Not Available | Positive | 1278816 - 1281611 | 102231.0 |
| glutamate carboxypeptidase | SAMN05444680_102235 | Not Available | Positive | 1281640 - 1282935 | 45975.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102236 | Not Available | Positive | 1282943 - 1283848 | 32653.0 |
| galactonate dehydratase | SAMN05444680_102237 | Not Available | Negative | 1284025 - 1285851 | 66306.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444680_102238 | Not Available | Negative | 1285848 - 1286867 | 35940.2 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN05444680_102239 | Not Available | Negative | 1286864 - 1287724 | 31242.5 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444680_102240 | Not Available | Positive | 1287866 - 1288939 | 39015.2 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444680_102241 | Not Available | Positive | 1288979 - 1290307 | 48536.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
