Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05444680_102222 | Not Available | Positive | 1267034 - 1268434 | 51495.2 |
| hypothetical protein | SAMN05444680_102223 | Not Available | Positive | 1268457 - 1268561 | 3511.19 |
| uncharacterized membrane protein yjjp, duf1212 family | SAMN05444680_102224 | Not Available | Positive | 1268563 - 1269876 | 46425.8 |
| signal-induced proliferation-associated 1 like protein 3 | SAMN05444680_102225 | Not Available | Negative | 1269819 - 1270427 | 19186.2 |
| hypothetical protein | SAMN05444680_102226 | Not Available | Positive | 1270529 - 1271380 | 27260.6 |
| Trna-ala | Not Available | Not Available | Positive | 1271617 - 1271692 | Not Available |
| arylformamidase | SAMN05444680_102228 | Not Available | Positive | 1271789 - 1272652 | 31286.3 |
| gmp reductase | SAMN05444680_102229 | Not Available | Negative | 1272764 - 1273741 | 35474.9 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05444680_102230 | Not Available | Positive | 1273982 - 1276366 | 88059.1 |
| hypothetical protein | SAMN05444680_102231 | Not Available | Negative | 1276487 - 1277281 | 27796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
