Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN05444680_102212 | Not Available | Negative | 1258528 - 1259001 | 17122.7 |
| uncharacterized membrane protein | SAMN05444680_102213 | Not Available | Negative | 1258998 - 1259381 | 13780.7 |
| response regulator receiver domain-containing protein | SAMN05444680_102214 | Not Available | Negative | 1259400 - 1259750 | 12455.9 |
| two component transcriptional regulator, luxr family | SAMN05444680_102215 | Not Available | Negative | 1259855 - 1260466 | 22214.9 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05444680_102216 | Not Available | Negative | 1260481 - 1262334 | 67011.3 |
| arylsulfatase | SAMN05444680_102217 | Not Available | Positive | 1262501 - 1264012 | 56946.6 |
| gaf domain-containing protein | SAMN05444680_102218 | Not Available | Negative | 1264043 - 1264633 | 21684.8 |
| Trna-lys | Not Available | Not Available | Positive | 1264700 - 1264775 | Not Available |
| 3-ketoacyl-coa thiolase | SAMN05444680_102220 | Not Available | Negative | 1264846 - 1266027 | 41344.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444680_102221 | Not Available | Positive | 1266129 - 1266836 | 24526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
