Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | SAMN05444680_102202 | Not Available | Positive | 1246583 - 1248820 | 82249.9 |
| hypothetical protein | SAMN05444680_102203 | Not Available | Positive | 1248873 - 1249070 | 6758.29 |
| pseudouridine-5'-phosphate glycosidase | SAMN05444680_102204 | Not Available | Negative | 1249133 - 1250080 | 33062.8 |
| feruloyl-coa synthase | SAMN05444680_102205 | Not Available | Negative | 1250148 - 1251656 | 53741.6 |
| putative acyl-coa dehydrogenase | SAMN05444680_102206 | Not Available | Negative | 1251670 - 1253304 | 59764.9 |
| thioesterase-like superfamily protein | SAMN05444680_102207 | Not Available | Negative | 1253342 - 1254148 | 28789.3 |
| transcriptional regulator, tetr family | SAMN05444680_102208 | Not Available | Positive | 1254265 - 1254900 | 23660.3 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05444680_102209 | Not Available | Positive | 1254908 - 1256350 | 52749.7 |
| bile acid:na+ symporter, bass family | SAMN05444680_102210 | Not Available | Negative | 1256357 - 1257235 | 30996.2 |
| hypothetical protein | SAMN05444680_102211 | Not Available | Negative | 1257312 - 1258523 | 43504.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
