Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_102182 | Not Available | Negative | 1228664 - 1229017 | 13167.6 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05444680_102183 | Not Available | Negative | 1228971 - 1229285 | 11381.4 |
| translation initiation factor if-1 | SAMN05444680_102184 | Not Available | Negative | 1229331 - 1229597 | 10054.3 |
| hypothetical protein | SAMN05444680_102185 | Not Available | Negative | 1229632 - 1229898 | 9840.02 |
| transcriptional regulator, iclr family | SAMN05444680_102186 | Not Available | Positive | 1230192 - 1230953 | 27229.3 |
| hypothetical protein | SAMN05444680_102187 | Not Available | Negative | 1231063 - 1231269 | 7801.44 |
| sporulation protein ylmc, prc-barrel domain family | SAMN05444680_102188 | Not Available | Negative | 1231297 - 1231629 | 12183.2 |
| hypothetical protein | SAMN05444680_102189 | Not Available | Negative | 1231793 - 1234114 | 83624.1 |
| citrate synthase | SAMN05444680_102190 | Not Available | Positive | 1234253 - 1235035 | 27863.0 |
| 3-methylfumaryl-coa hydratase | SAMN05444680_102191 | Not Available | Positive | 1235056 - 1235922 | 31526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
