Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein, phot family | SAMN05444680_10159 | Not Available | Positive | 68038 - 69090 | 36843.7 |
| phosphate abc transporter membrane protein 1, phot family | SAMN05444680_10160 | Not Available | Positive | 69111 - 70181 | 37087.3 |
| phosphate abc transporter membrane protein 2, phot family | SAMN05444680_10161 | Not Available | Positive | 70178 - 71062 | 31461.5 |
| phosphate abc transporter atp-binding protein, phot family | SAMN05444680_10162 | Not Available | Positive | 71068 - 71847 | 28938.0 |
| phosphate uptake regulator, phou | SAMN05444680_10163 | Not Available | Positive | 71857 - 72558 | 25944.2 |
| two-component system, ompr family, phosphate regulon response regulator phob | SAMN05444680_10164 | Not Available | Positive | 72613 - 73305 | 25885.3 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05444680_10165 | Not Available | Positive | 73345 - 74679 | 49532.5 |
| multidrug resistance protein, mate family | SAMN05444680_10166 | Not Available | Negative | 74663 - 76003 | 47993.0 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05444680_10167 | Not Available | Negative | 75996 - 77726 | 62550.4 |
| large subunit ribosomal protein l31 | SAMN05444680_10168 | Not Available | Negative | 77808 - 78065 | 9665.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
