Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN05444680_102152 | Not Available | Positive | 1194381 - 1194866 | 19012.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_102153 | Not Available | Positive | 1194874 - 1196496 | 58899.9 |
| acetyl-coa acetyltransferase | SAMN05444680_102154 | Not Available | Positive | 1196493 - 1197662 | 42020.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_102155 | Not Available | Positive | 1197659 - 1198912 | 45420.7 |
| kynurenine formamidase | SAMN05444680_102156 | Not Available | Positive | 1198928 - 1199740 | 29867.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_102157 | Not Available | Positive | 1199737 - 1200468 | 25532.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_102158 | Not Available | Positive | 1200680 - 1201837 | 40658.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_102159 | Not Available | Positive | 1201954 - 1203096 | 39765.8 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_102160 | Not Available | Positive | 1203124 - 1204449 | 49513.6 |
| 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | SAMN05444680_102161 | Not Available | Positive | 1204446 - 1204916 | 17778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
