Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna and rna helicase | SAMN05444680_102142 | Not Available | Positive | 1181771 - 1183543 | 64114.1 |
| opine dehydrogenase | SAMN05444680_102143 | Not Available | Positive | 1183766 - 1184839 | 38621.3 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444680_102144 | Not Available | Positive | 1184829 - 1185830 | 36021.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_102145 | Not Available | Positive | 1185827 - 1186627 | 29106.7 |
| nadph2:quinone reductase | SAMN05444680_102146 | Not Available | Positive | 1186624 - 1187568 | 32737.6 |
| dna-binding transcriptional regulator, marr family | SAMN05444680_102147 | Not Available | Negative | 1187627 - 1188172 | 20223.0 |
| indolepyruvate ferredoxin oxidoreductase alpha subunit | SAMN05444680_102148 | Not Available | Positive | 1188256 - 1190418 | 77648.2 |
| indolepyruvate ferredoxin oxidoreductase beta subunit | SAMN05444680_102149 | Not Available | Positive | 1190544 - 1192046 | 54407.4 |
| vanillate o-demethylase ferredoxin subunit | SAMN05444680_102150 | Not Available | Positive | 1192061 - 1193053 | 36240.4 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_102151 | Not Available | Positive | 1193068 - 1194381 | 49677.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
