Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | SAMN05444680_102132 | Not Available | Positive | 1173445 - 1173999 | 20081.0 |
| trna (guanine37-n(1)-) methyltransferase | SAMN05444680_102133 | Not Available | Positive | 1174025 - 1174771 | 27285.7 |
| lsu ribosomal protein l19p | SAMN05444680_102134 | Not Available | Positive | 1174894 - 1175271 | 13902.8 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05444680_102135 | Not Available | Positive | 1175443 - 1176159 | 26245.3 |
| adenosylcobinamide-phosphate synthase | SAMN05444680_102136 | Not Available | Positive | 1176189 - 1177190 | 36566.3 |
| histidinol-phosphate aminotransferase | SAMN05444680_102137 | Not Available | Positive | 1177208 - 1178290 | 39320.2 |
| ribosome biogenesis gtpase | SAMN05444680_102138 | Not Available | Negative | 1178287 - 1179213 | 33638.0 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN05444680_102139 | Not Available | Negative | 1179256 - 1179591 | 12347.7 |
| ste24 endopeptidase | SAMN05444680_102140 | Not Available | Negative | 1179608 - 1180879 | 46597.6 |
| oligoribonuclease | SAMN05444680_102141 | Not Available | Positive | 1180957 - 1181547 | 22206.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
