Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05444680_102122 | Not Available | Negative | 1164783 - 1165823 | 35994.6 |
| regulatory inactivation of dnaa hda protein | SAMN05444680_102123 | Not Available | Positive | 1166091 - 1166777 | 25028.0 |
| poly(a) polymerase | SAMN05444680_102124 | Not Available | Positive | 1166770 - 1168386 | 59312.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05444680_102125 | Not Available | Positive | 1168383 - 1168841 | 16663.1 |
| hypothetical protein | SAMN05444680_102126 | Not Available | Positive | 1168937 - 1169581 | 24683.4 |
| inorganic phosphate transporter, pit family | SAMN05444680_102127 | Not Available | Positive | 1169595 - 1170605 | 35138.6 |
| glutamate dehydrogenase (nadp+) | SAMN05444680_102128 | Not Available | Negative | 1170648 - 1171991 | 48030.8 |
| hypothetical protein | SAMN05444680_102129 | Not Available | Negative | 1172020 - 1172472 | 16056.5 |
| phosphinothricin acetyltransferase | SAMN05444680_102130 | Not Available | Negative | 1172469 - 1172990 | 18711.2 |
| small subunit ribosomal protein s16 | SAMN05444680_102131 | Not Available | Positive | 1173166 - 1173429 | 9672.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
