Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine aminotransferase | SAMN05444680_102112 | Not Available | Negative | 1156001 - 1157206 | 42924.1 |
| protein of unknown function | SAMN05444680_102113 | Not Available | Positive | 1157374 - 1157733 | 13015.6 |
| ssu ribosomal protein s20p | SAMN05444680_102114 | Not Available | Negative | 1157881 - 1158180 | 10704.0 |
| putative peptidoglycan lipid ii flippase | SAMN05444680_102115 | Not Available | Positive | 1158206 - 1159912 | 60526.1 |
| regulator of sirc expression, contains transglutaminase-like and tpr domains | SAMN05444680_102116 | Not Available | Positive | 1159979 - 1160830 | 31863.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05444680_102117 | Not Available | Positive | 1160830 - 1161309 | 17338.6 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444680_102118 | Not Available | Negative | 1161427 - 1162428 | 35936.4 |
| dj-1/pfpi family protein | SAMN05444680_102119 | Not Available | Negative | 1162407 - 1163030 | 22171.6 |
| nicotinamidase-related amidase | SAMN05444680_102120 | Not Available | Negative | 1163027 - 1163599 | 20792.7 |
| predicted purr-regulated permease perm | SAMN05444680_102121 | Not Available | Negative | 1163711 - 1164838 | 40261.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
