Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein a | SAMN05444680_102102 | Not Available | Positive | 1146272 - 1146562 | 10125.2 |
| ferrous iron transport protein b | SAMN05444680_102103 | Not Available | Positive | 1146555 - 1148453 | 67742.8 |
| hypothetical protein | SAMN05444680_102104 | Not Available | Positive | 1148455 - 1148730 | 9262.19 |
| salicylate hydroxylase | SAMN05444680_102105 | Not Available | Positive | 1148743 - 1149921 | 41346.7 |
| hypothetical protein | SAMN05444680_102106 | Not Available | Negative | 1149923 - 1151161 | 44162.7 |
| kynurenine formamidase | SAMN05444680_102107 | Not Available | Negative | 1151210 - 1151860 | 23376.1 |
| protein of unknown function | SAMN05444680_102108 | Not Available | Negative | 1151921 - 1153018 | 39527.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_102109 | Not Available | Negative | 1153041 - 1154021 | 33710.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_102110 | Not Available | Positive | 1154111 - 1155070 | 34314.4 |
| ornithine carbamoyltransferase | SAMN05444680_102111 | Not Available | Negative | 1155075 - 1156004 | 34603.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
