Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase subunit d | SAMN05444680_10292 | Not Available | Negative | 1134299 - 1134664 | 13844.5 |
| succinate dehydrogenase subunit c | SAMN05444680_10293 | Not Available | Negative | 1134678 - 1135124 | 16459.5 |
| gntr family transcriptional regulator | SAMN05444680_10294 | Not Available | Negative | 1135342 - 1136121 | 29009.9 |
| malate dehydrogenase (nad) | SAMN05444680_10295 | Not Available | Positive | 1136297 - 1137283 | 34984.2 |
| trans-aconitate 2-methyltransferase | SAMN05444680_10296 | Not Available | Positive | 1137300 - 1138076 | 28991.5 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN05444680_10297 | Not Available | Positive | 1138087 - 1139097 | 35293.1 |
| hypothetical protein | SAMN05444680_10298 | Not Available | Positive | 1139125 - 1139685 | 19970.3 |
| aconitase | SAMN05444680_10299 | Not Available | Positive | 1139755 - 1142346 | 92768.6 |
| transcriptional regulator, contains xre-family hth domain | SAMN05444680_102100 | Not Available | Negative | 1142409 - 1143236 | 29842.9 |
| aconitase | SAMN05444680_102101 | Not Available | Positive | 1143372 - 1146110 | 98765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
