Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate semialdehyde dehydrogenase | SAMN05444680_10282 | Not Available | Negative | 1124204 - 1125346 | 40554.4 |
| 3-isopropylmalate dehydrogenase | SAMN05444680_10283 | Not Available | Negative | 1125436 - 1126524 | 39099.0 |
| 3-isopropylmalate dehydratase, small subunit | SAMN05444680_10284 | Not Available | Negative | 1126558 - 1127208 | 24426.4 |
| 3-isopropylmalate dehydratase, large subunit | SAMN05444680_10285 | Not Available | Negative | 1127225 - 1128646 | 51138.0 |
| transcriptional regulator, lysr family | SAMN05444680_10286 | Not Available | Negative | 1128679 - 1129623 | 34239.4 |
| predicted small secreted protein | SAMN05444680_10287 | Not Available | Negative | 1129743 - 1129883 | 4853.06 |
| citrate synthase | SAMN05444680_10288 | Not Available | Negative | 1130028 - 1131338 | 48536.7 |
| antitoxin cptb | SAMN05444680_10289 | Not Available | Negative | 1131362 - 1131664 | 11347.7 |
| succinate dehydrogenase subunit b | SAMN05444680_10290 | Not Available | Negative | 1131680 - 1132381 | 26603.3 |
| succinate dehydrogenase subunit a | SAMN05444680_10291 | Not Available | Negative | 1132403 - 1134211 | 65933.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
