Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical chaperone protein | SAMN05444680_10272 | Not Available | Negative | 1112412 - 1113689 | 45992.5 |
| lysyl-trna synthetase, class ii | SAMN05444680_10273 | Not Available | Negative | 1113686 - 1115248 | 58238.5 |
| hypothetical protein | SAMN05444680_10274 | Not Available | Negative | 1115371 - 1116018 | 24099.6 |
| yggt family protein | SAMN05444680_10275 | Not Available | Positive | 1116070 - 1116630 | 20140.9 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444680_10276 | Not Available | Negative | 1116720 - 1117592 | 31810.7 |
| tryptophan synthase, alpha chain | SAMN05444680_10277 | Not Available | Negative | 1117617 - 1118462 | 29590.1 |
| tryptophan synthase, beta chain | SAMN05444680_10278 | Not Available | Negative | 1118459 - 1119736 | 45752.4 |
| phosphoribosylanthranilate isomerase | SAMN05444680_10279 | Not Available | Negative | 1119792 - 1120481 | 23674.1 |
| trna pseudouridine38-40 synthase | SAMN05444680_10280 | Not Available | Negative | 1120478 - 1121290 | 29851.6 |
| pilus assembly protein fimv | SAMN05444680_10281 | Not Available | Negative | 1121317 - 1123977 | 90431.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
