Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein lepa | SAMN05444680_10262 | Not Available | Positive | 1104170 - 1105876 | 62210.2 |
| signal peptidase i serine peptidase. merops family s26a | SAMN05444680_10263 | Not Available | Positive | 1105880 - 1106851 | 36760.6 |
| protein of unknown function | SAMN05444680_10264 | Not Available | Positive | 1106881 - 1107237 | 13028.0 |
| rnase iii | SAMN05444680_10265 | Not Available | Positive | 1107266 - 1107964 | 25038.2 |
| gtp-binding protein era | SAMN05444680_10266 | Not Available | Positive | 1107961 - 1108899 | 34988.3 |
| dna replication and repair protein reco | SAMN05444680_10267 | Not Available | Positive | 1108900 - 1109658 | 27440.1 |
| pyridoxine 5'-phosphate synthase | SAMN05444680_10268 | Not Available | Positive | 1109655 - 1110425 | 28132.2 |
| holo-[acyl-carrier protein] synthase | SAMN05444680_10269 | Not Available | Positive | 1110422 - 1110817 | 14874.1 |
| beta-n-acetylhexosaminidase | SAMN05444680_10270 | Not Available | Positive | 1110814 - 1111887 | 38798.8 |
| hypothetical protein | SAMN05444680_10271 | Not Available | Negative | 1111888 - 1112415 | 20078.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
